plinder.core.utils.config

plinder.core.utils.config.get_config_hash(config_obj: Any) → str

Return a consistent hash of any object, dataclass, or omegaconf container.

Parameters:

config_objdict | dataclass | DictConfig

the configuration to hash

Returns:

config_hashstr

the hash of the configuration

class plinder.core.utils.config.DataConfig(plinder_release: str = <factory>, plinder_release_number: str = <factory>, plinder_mount: str = <factory>, plinder_bucket: str = <factory>, scores: str = 'scores', source_mmcifs: str = 'source_mmcifs', force_update: bool = False)

Bases: object

A class for all the data configuration.

Attributes:

plinder_releasestr

the ingest month for the PLINDER release, formatted as YYYY-MM

plinder_release_numberstr

the numbered release for that ingest month

plinder_mountstr, default=”~/.local/share/plinder”

the resting place for the plinder dataset

plinder_bucketstr, default=”plinder”

the local cache subdirectory name

plinder_dirstr

set automatically

plinder_remotestr

set automatically; the release root under PLINDER_MIRROR_URL (default https://cameo3d.org/plinder), in PLINDER-YYYY-MM directories

Notes

plinder_dir is always derived from plinder_mount/plinder_release so do not set it manually!

plinder_release: str

plinder_release_number: str

plinder_mount: str

plinder_bucket: str

plinder_dir: str

plinder_remote: str

scores: str = 'scores'

source_mmcifs: str = 'source_mmcifs'

force_update: bool = False

class plinder.core.utils.config.ContextConfig(two_char_codes: Any = '', pdb_ids: Any = '', system_ids: Any = '')

Bases: object

two_char_codes: Any = ''

pdb_ids: Any = ''

system_ids: Any = ''